Molecular diagnostics of plasmodium parasites
Malaria is a major public health problem in tropical and subtropical areas, especially in Southeast Asia region, caused by any of five species of Plasmodium (P. falciparum, P. vivax, P. malariae, P. ovale and P. knowlesi). It still remains a leading cause of morbidity and mortality worldwide. The...
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my-ums-ep.195662018-03-27T06:32:25Z Molecular diagnostics of plasmodium parasites 2015 Cheronie Shely Stanis QR Microbiology Malaria is a major public health problem in tropical and subtropical areas, especially in Southeast Asia region, caused by any of five species of Plasmodium (P. falciparum, P. vivax, P. malariae, P. ovale and P. knowlesi). It still remains a leading cause of morbidity and mortality worldwide. The aim of this study was to design new molecular markers for identification of Plasmodium spp. and compare the parasite species identification using the molecular methods (nested PCR and new multiplex PCR) and microscopy. Blood samples on filter papers were subject to conventional PCR methods using primers designed by us in multiplex PCR and compared with primers of nested PCR of Singh et at. (1999; 2004), as well as with microscopic identification. Of the 109 samples identified as malaria positive by microscopic examination, 15 samples were positive for P. falciparum, 14 for P. vivax, six for P. knowlesi, 72 for P. malariae, two for mixed infection of P. falciparum/ P. malariae and 20 which serve as negative controls. Both multiplex PCR and nested PCR detected 12 of P. falciparum single infections. For P. vivax, nine were detected by multiplex and 12 detected by nested PCR. For 72 P. malariae cases, nested PCR detected two as P. falciparum, 57 as P. knowlesi seven as P. malariae and six negative. However, multiplex PCR identified two as P. falciparum, 57 as P. knowlesi, ten as P. malariae and three negative. For 28 samples which had been identified as P. falciparum, P. malariae and P. vivax by microscopy, they were identified as negative by both multiplex PCR and nested PCR. This shows multiplex PCR is highly sensitive and specific. The multiplex PCR assay is faster than nested PCR and could be used as an alternative molecular diagnosis for the Identification and detection of all Plasmodium spp. as it has shorter the time required for screening a large number of samples. 2015 Thesis https://eprints.ums.edu.my/id/eprint/19566/ https://eprints.ums.edu.my/id/eprint/19566/1/Molecular%20diagnostics%20of%20plasmodium%20parasites.pdf text en public masters Universiti Malaysia Sabah Faculty of Medicine and Health Sciences |
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Universiti Malaysia Sabah |
| collection |
UMS Institutional Repository |
| language |
English |
| topic |
QR Microbiology |
| spellingShingle |
QR Microbiology Cheronie Shely Stanis Molecular diagnostics of plasmodium parasites |
| description |
Malaria is a major public health problem in tropical and subtropical areas,
especially in Southeast Asia region, caused by any of five species of Plasmodium
(P. falciparum, P. vivax, P. malariae, P. ovale and P. knowlesi). It still remains a
leading cause of morbidity and mortality worldwide. The aim of this study was to
design new molecular markers for identification of Plasmodium spp. and compare
the parasite species identification using the molecular methods (nested PCR and
new multiplex PCR) and microscopy. Blood samples on filter papers were subject
to conventional PCR methods using primers designed by us in multiplex PCR and
compared with primers of nested PCR of Singh et at. (1999; 2004), as well as with
microscopic identification. Of the 109 samples identified as malaria positive by
microscopic examination, 15 samples were positive for P. falciparum, 14 for P.
vivax, six for P. knowlesi, 72 for P. malariae, two for mixed infection of P.
falciparum/ P. malariae and 20 which serve as negative controls. Both multiplex
PCR and nested PCR detected 12 of P. falciparum single infections. For P. vivax,
nine were detected by multiplex and 12 detected by nested PCR. For 72 P.
malariae cases, nested PCR detected two as P. falciparum, 57 as P. knowlesi
seven as P. malariae and six negative. However, multiplex PCR identified two as P.
falciparum, 57 as P. knowlesi, ten as P. malariae and three negative. For 28
samples which had been identified as P. falciparum, P. malariae and P. vivax by
microscopy, they were identified as negative by both multiplex PCR and nested
PCR. This shows multiplex PCR is highly sensitive and specific. The multiplex PCR
assay is faster than nested PCR and could be used as an alternative molecular
diagnosis for the Identification and detection of all Plasmodium spp. as it has
shorter the time required for screening a large number of samples. |
| format |
Thesis |
| qualification_level |
Master's degree |
| author |
Cheronie Shely Stanis |
| author_facet |
Cheronie Shely Stanis |
| author_sort |
Cheronie Shely Stanis |
| title |
Molecular diagnostics of plasmodium parasites |
| title_short |
Molecular diagnostics of plasmodium parasites |
| title_full |
Molecular diagnostics of plasmodium parasites |
| title_fullStr |
Molecular diagnostics of plasmodium parasites |
| title_full_unstemmed |
Molecular diagnostics of plasmodium parasites |
| title_sort |
molecular diagnostics of plasmodium parasites |
| granting_institution |
Universiti Malaysia Sabah |
| granting_department |
Faculty of Medicine and Health Sciences |
| publishDate |
2015 |
| url |
https://eprints.ums.edu.my/id/eprint/19566/1/Molecular%20diagnostics%20of%20plasmodium%20parasites.pdf |
| _version_ |
1747836517467815936 |