Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery

Optimized fertilizer application is essential in ensuring the best yields and profits. In the last two decades, fertilizer application in the palm oil industry of Malaysia has increased by 169% and more than 200% in amount and value respectively. The excessive use of fertilizer is seen as a deterren...

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Main Author:	Kok, Zhi Hong
Format:	Thesis
Language:	English
Published:	2021
Subjects:	Agricultural machinery Machine learning
Online Access:	http://psasir.upm.edu.my/id/eprint/92779/1/FK%202021%2060%20IR.pdf
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spelling	my-upm-ir.927792022-04-26T04:28:29Z Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery 2021-05 Kok, Zhi Hong Optimized fertilizer application is essential in ensuring the best yields and profits. In the last two decades, fertilizer application in the palm oil industry of Malaysia has increased by 169% and more than 200% in amount and value respectively. The excessive use of fertilizer is seen as a deterrent to sustainable agriculture, both environmentally and economically. Unfortunately, current nutrient monitoring methods for better fertilizer management are inefficient, desctructive and only adoptable for industrial plantations. This suggests the need for a more conventional and efficient approach for fertilizer management. Remote sensing (RS) and machine learning (ML) have provided possibilities to monitor crop nutrient in a more efficient approach. Therefore, this study aims to assess the feasibility of Landsat-8 OLI/TIRS RS imageries in classifying oil palm tree macronutrient levels on a plot basis with ML models such as Support Vector Machine (SVM), Multilayer Perceptron (MLP) and Random Forest (RF). The study consisted of 36 plots in which fertilizer applications and foliar analyses of palm leaves from Frond 17 (i.e. Nitrogen(N), Phosphorus(P), Potassium(K), Magnesium(Mg) and Calcium(Ca) ) were conducted for 5 consecutive years (2013 - 2017). Plot surface reflectance was acquired from specific scenes of respective years by applying filters, overlay extraction and vegetation indices (VI). The study explored the effects of the applied methodology with four scenarios as input for the models via a 50:50 calibration and validation data split for 30 iterations: 1.) initial spectral data; 2.) filtered spectral data; 3.) filtered spectral features with selection; and 4.) all filtered spectral features. Using the Jeffries- Matusita (J-M) distance, Rank filter was found to be the best filter for image filtering. VIs related to soil background or atmospheric correction were selected as predictors for N (i.e. EVI, SARVI, ARVI, GARI, MSAVI, EVI2), while those related to NIR for K (i.e. NDVI, TVI, IPVI). The best mean classification accuracy for N, K, Mg and Ca of each model at validation stage are as follow: SVM at 79.7%, 76.6%, 63.5% and 87% respectively; MLP at 76.1%, 73.4%, 61% and 87% respectively; and RF at 76.9%, 73.6%, 62.1% and 86.4% respectively. SVM, RF and MLP experienced improvement in performance with the use of filters or feature selection, with MLP benefiting the most. with the use of filters or feature selection or both (Scenario 2 and 3). However, uneven sample distribution led to misleading results for Ca and occasional overfitting by models for other nutrients. SVM was reported with the best model performance, followed by RF and MLP; while RF for model stability, followed by SVM and MLP. Accounting both factors, the study concluded the potential of applying Landsat-8 images in classifying plot N level excessiveness with RF while possibly K level excessiveness with SVM or RF. Agricultural machinery Machine learning 2021-05 Thesis http://psasir.upm.edu.my/id/eprint/92779/ http://psasir.upm.edu.my/id/eprint/92779/1/FK%202021%2060%20IR.pdf text en public masters Universiti Putra Malaysia Agricultural machinery Machine learning Mohamed Shariff, Abdul Rashid
institution	Universiti Putra Malaysia
collection	PSAS Institutional Repository
language	English
advisor	Mohamed Shariff, Abdul Rashid
topic	Agricultural machinery Machine learning
spellingShingle	Agricultural machinery Machine learning Kok, Zhi Hong Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
description	Optimized fertilizer application is essential in ensuring the best yields and profits. In the last two decades, fertilizer application in the palm oil industry of Malaysia has increased by 169% and more than 200% in amount and value respectively. The excessive use of fertilizer is seen as a deterrent to sustainable agriculture, both environmentally and economically. Unfortunately, current nutrient monitoring methods for better fertilizer management are inefficient, desctructive and only adoptable for industrial plantations. This suggests the need for a more conventional and efficient approach for fertilizer management. Remote sensing (RS) and machine learning (ML) have provided possibilities to monitor crop nutrient in a more efficient approach. Therefore, this study aims to assess the feasibility of Landsat-8 OLI/TIRS RS imageries in classifying oil palm tree macronutrient levels on a plot basis with ML models such as Support Vector Machine (SVM), Multilayer Perceptron (MLP) and Random Forest (RF). The study consisted of 36 plots in which fertilizer applications and foliar analyses of palm leaves from Frond 17 (i.e. Nitrogen(N), Phosphorus(P), Potassium(K), Magnesium(Mg) and Calcium(Ca) ) were conducted for 5 consecutive years (2013 - 2017). Plot surface reflectance was acquired from specific scenes of respective years by applying filters, overlay extraction and vegetation indices (VI). The study explored the effects of the applied methodology with four scenarios as input for the models via a 50:50 calibration and validation data split for 30 iterations: 1.) initial spectral data; 2.) filtered spectral data; 3.) filtered spectral features with selection; and 4.) all filtered spectral features. Using the Jeffries- Matusita (J-M) distance, Rank filter was found to be the best filter for image filtering. VIs related to soil background or atmospheric correction were selected as predictors for N (i.e. EVI, SARVI, ARVI, GARI, MSAVI, EVI2), while those related to NIR for K (i.e. NDVI, TVI, IPVI). The best mean classification accuracy for N, K, Mg and Ca of each model at validation stage are as follow: SVM at 79.7%, 76.6%, 63.5% and 87% respectively; MLP at 76.1%, 73.4%, 61% and 87% respectively; and RF at 76.9%, 73.6%, 62.1% and 86.4% respectively. SVM, RF and MLP experienced improvement in performance with the use of filters or feature selection, with MLP benefiting the most. with the use of filters or feature selection or both (Scenario 2 and 3). However, uneven sample distribution led to misleading results for Ca and occasional overfitting by models for other nutrients. SVM was reported with the best model performance, followed by RF and MLP; while RF for model stability, followed by SVM and MLP. Accounting both factors, the study concluded the potential of applying Landsat-8 images in classifying plot N level excessiveness with RF while possibly K level excessiveness with SVM or RF.
format	Thesis
qualification_level	Master's degree
author	Kok, Zhi Hong
author_facet	Kok, Zhi Hong
author_sort	Kok, Zhi Hong
title	Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
title_short	Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
title_full	Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
title_fullStr	Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
title_full_unstemmed	Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery
title_sort	machine learning classification of macronutrient levels in oil palm trees with landsat-8 imagery
granting_institution	Universiti Putra Malaysia
publishDate	2021
url	http://psasir.upm.edu.my/id/eprint/92779/1/FK%202021%2060%20IR.pdf
_version_	1747813764830330880

Machine learning classification of macronutrient levels in oil palm trees with Landsat-8 imagery

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