Molecular Genetic Characterization of Different Accessions of Centella Asiatica
Centella asiatica or locally known as "pegaga" belongs to the Apiceae family. This medicinal plant is one of the most important medicinal herbs, and widely used in health foods, pharmaceutical and cosmetic industries. Twelve accessions of C. asiatica planted in MARDI, originated from di...
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my-upm-ir.95422012-05-21T03:32:29Z Molecular Genetic Characterization of Different Accessions of Centella Asiatica 2003-01 Wong, Sook Mun Centella asiatica or locally known as "pegaga" belongs to the Apiceae family. This medicinal plant is one of the most important medicinal herbs, and widely used in health foods, pharmaceutical and cosmetic industries. Twelve accessions of C. asiatica planted in MARDI, originated from different locations in Peninsular Malaysia, were used for this study. Phenotypic differences among these accessions are not very distinct, thus this study is undeitaken to determine whether there are any genetic differences. DNA markers, unaff ected by environmental or physiological factors, have potential utility in the characterization of plant species. High discriminating power of this class of markers demonstrated uniformity and stability within genetically complex cultivars. Good quality DNA was extracted from leaf samples using conventional hexadecyltrimethylammonium bromide (CTAB) method. Two PeR-based DNA markers system. namely Amplified Fragment Length Polymorphisms (AFLPs) and Long Primer Randomly Amplified Polymorphic DNA (LP-RAPDs), were employed. This study has successfully analyzed the genetic relationships among the accessions of C. asiatica. Two phylogenetic trees bad been constructed from the unweighted pair group method with arithmatical average (UPGMA) pairwise analyses. Genetic distances was calculated based on. the Dice similarity index. From both analyses, the CA01 and CA02 as wen as CA05 and CA06 were closer (D=0.119) within the same cluster indicating that they are closely related. Based on the genetic distances, CA10 represented as highest distant group in the LP-RAPDs analyses whereas CA03 represented as highest distant group in the AFLPs analyses. Furthermore, diagnostic band with highest molecular weight (3000 bp) was found in CA10 by using long primer PEH A3. The amplification of CA03 genotypes with AFLP primer pair ACG/CTA has shown a unique DNA profile. In addition, CA03 is easily distinguish from other accessions morphologically due to its wavy shape of the plant leaf. Molecular genetics - Malaysia Plants - Classification - Molecular aspects - Malaysia 2003-01 Thesis http://psasir.upm.edu.my/id/eprint/9542/ http://psasir.upm.edu.my/id/eprint/9542/1/FSAS_2003_12_A.pdf application/pdf en public masters Universiti Putra Malaysia Molecular genetics - Malaysia Plants - Classification - Molecular aspects - Malaysia Faculty of Science and Environmental Studies English |
| institution |
Universiti Putra Malaysia |
| collection |
PSAS Institutional Repository |
| language |
English English |
| topic |
Molecular genetics - Malaysia Plants - Classification - Molecular aspects - Malaysia |
| spellingShingle |
Molecular genetics - Malaysia Plants - Classification - Molecular aspects - Malaysia Wong, Sook Mun Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| description |
Centella asiatica or locally known as "pegaga" belongs to the Apiceae family. This
medicinal plant is one of the most important medicinal herbs, and widely used in health
foods, pharmaceutical and cosmetic industries. Twelve accessions of C. asiatica planted
in MARDI, originated from different locations in Peninsular Malaysia, were used for this
study. Phenotypic differences among these accessions are not very distinct, thus this
study is undeitaken to determine whether there are any genetic differences.
DNA markers, unaff ected by environmental or physiological factors, have potential
utility in the characterization of plant species. High discriminating power of this class of
markers demonstrated uniformity and stability within genetically complex cultivars.
Good quality DNA was extracted from leaf samples using conventional
hexadecyltrimethylammonium bromide (CTAB) method. Two PeR-based DNA markers system. namely Amplified Fragment Length Polymorphisms (AFLPs) and Long Primer
Randomly Amplified Polymorphic DNA (LP-RAPDs), were employed. This study has
successfully analyzed the genetic relationships among the accessions of C. asiatica. Two
phylogenetic trees bad been constructed from the unweighted pair group method with
arithmatical average (UPGMA) pairwise analyses. Genetic distances was calculated
based on. the Dice similarity index. From both analyses, the CA01 and CA02 as wen as
CA05 and CA06 were closer (D=0.119) within the same cluster indicating that they are
closely related. Based on the genetic distances, CA10 represented as highest distant group
in the LP-RAPDs analyses whereas CA03 represented as highest distant group in the
AFLPs analyses. Furthermore, diagnostic band with highest molecular weight (3000 bp)
was found in CA10 by using long primer PEH A3. The amplification of CA03 genotypes
with AFLP primer pair ACG/CTA has shown a unique DNA profile. In addition, CA03 is
easily distinguish from other accessions morphologically due to its wavy shape of the
plant leaf. |
| format |
Thesis |
| qualification_level |
Master's degree |
| author |
Wong, Sook Mun |
| author_facet |
Wong, Sook Mun |
| author_sort |
Wong, Sook Mun |
| title |
Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| title_short |
Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| title_full |
Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| title_fullStr |
Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| title_full_unstemmed |
Molecular Genetic Characterization of Different Accessions of Centella Asiatica |
| title_sort |
molecular genetic characterization of different accessions of centella asiatica |
| granting_institution |
Universiti Putra Malaysia |
| granting_department |
Faculty of Science and Environmental Studies |
| publishDate |
2003 |
| url |
http://psasir.upm.edu.my/id/eprint/9542/1/FSAS_2003_12_A.pdf |
| _version_ |
1747810977603125248 |