Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi

RNA bukan-pengkod-protein (npcRNA) merupakan satu kelas pengawalatur-ribo yang bertindak di dalam bentuk kompleks RNA-protein (sebagai RNPs) didalam pelbagai laluan pengawalaturan. Tesis ini memberikan tumpuan ke atas_ pengenalpastian npcRNA secara eksperimental daripada bakteria patogenik Salmon...

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主要作者: Zakaria, Robaiza
格式: Thesis
语言:English
出版: 2008
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spelling my-usm-ep.311482017-05-15T04:43:31Z Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi 2008-06 Zakaria, Robaiza R735-854 Medical education. Medical schools. Research RNA bukan-pengkod-protein (npcRNA) merupakan satu kelas pengawalatur-ribo yang bertindak di dalam bentuk kompleks RNA-protein (sebagai RNPs) didalam pelbagai laluan pengawalaturan. Tesis ini memberikan tumpuan ke atas_ pengenalpastian npcRNA secara eksperimental daripada bakteria patogenik Salmonella enterica serovar Typhi (S. Typhi), penyebab penyakit demam kepialu. Melalui pendekatan RNomiks Eksperimental, 82 calon novel npcRNAdaripada perpustakaan cDNA S. Typhi telah dikenalpasti dan dicirikan. Daripada jumlah ini, 28 telah ditranskrip daripada IGR, 29 ditranskrip di dalam arah antisense kepada ORF dan 18 dikenalpasti bertindihan dengan ORF. Sementara 7 calon yang lain telah ditranskIlp daripada kawasan repititif dan beberapa kedudukan bukan repitatif yang lain. Sebelas npcRNA merupakan npcRNAs yang telahpun dilaporkan. Non-protein-coding RNA (npcRNA) is a large class of riboregulators that act in complex with proteins (as RNPs) in diverse regulatory pathways. This thesis focused on the experimental identification of small npcRNAs from Salmonella enterica serovar Typhi (s. Typhi), the aetiological agent of typhoid fever. By an Experimental RNomics approach, 82 species of uncharacterized novel npcRNA candidates were identified from library generated from different growth phases of a clinically isolated S. Typhi. From this, 28 were transcribed from the IGRs, 29 were transcribed in the antisense orientation of the ORFs and 18 were identified to overlap the ORFs. Another 7 candidates were transcribed from repetitive regions and several non-repetitive locations. Eleven known npcRNAs were also detected. 2008-06 Thesis http://eprints.usm.my/31148/ http://eprints.usm.my/31148/1/ROBAIZA_BIN_ZAKARIA.pdf application/pdf en public phd doctoral Universiti Sains Malaysia Pusat Pengajian Sains Perubatan
institution Universiti Sains Malaysia
collection USM Institutional Repository
language English
topic R735-854 Medical education
Medical schools
Research
spellingShingle R735-854 Medical education
Medical schools
Research
Zakaria, Robaiza
Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
description RNA bukan-pengkod-protein (npcRNA) merupakan satu kelas pengawalatur-ribo yang bertindak di dalam bentuk kompleks RNA-protein (sebagai RNPs) didalam pelbagai laluan pengawalaturan. Tesis ini memberikan tumpuan ke atas_ pengenalpastian npcRNA secara eksperimental daripada bakteria patogenik Salmonella enterica serovar Typhi (S. Typhi), penyebab penyakit demam kepialu. Melalui pendekatan RNomiks Eksperimental, 82 calon novel npcRNAdaripada perpustakaan cDNA S. Typhi telah dikenalpasti dan dicirikan. Daripada jumlah ini, 28 telah ditranskrip daripada IGR, 29 ditranskrip di dalam arah antisense kepada ORF dan 18 dikenalpasti bertindihan dengan ORF. Sementara 7 calon yang lain telah ditranskIlp daripada kawasan repititif dan beberapa kedudukan bukan repitatif yang lain. Sebelas npcRNA merupakan npcRNAs yang telahpun dilaporkan. Non-protein-coding RNA (npcRNA) is a large class of riboregulators that act in complex with proteins (as RNPs) in diverse regulatory pathways. This thesis focused on the experimental identification of small npcRNAs from Salmonella enterica serovar Typhi (s. Typhi), the aetiological agent of typhoid fever. By an Experimental RNomics approach, 82 species of uncharacterized novel npcRNA candidates were identified from library generated from different growth phases of a clinically isolated S. Typhi. From this, 28 were transcribed from the IGRs, 29 were transcribed in the antisense orientation of the ORFs and 18 were identified to overlap the ORFs. Another 7 candidates were transcribed from repetitive regions and several non-repetitive locations. Eleven known npcRNAs were also detected.
format Thesis
qualification_name Doctor of Philosophy (PhD.)
qualification_level Doctorate
author Zakaria, Robaiza
author_facet Zakaria, Robaiza
author_sort Zakaria, Robaiza
title Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
title_short Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
title_full Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
title_fullStr Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
title_full_unstemmed Experimental Rnomics: Towards The Identification And Characterization Of Non-Protein-Coding Ribonucleic Acids In Pathogenic Agent, Salmonella Typhi
title_sort experimental rnomics: towards the identification and characterization of non-protein-coding ribonucleic acids in pathogenic agent, salmonella typhi
granting_institution Universiti Sains Malaysia
granting_department Pusat Pengajian Sains Perubatan
publishDate 2008
url http://eprints.usm.my/31148/1/ROBAIZA_BIN_ZAKARIA.pdf
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